CDS

Accession Number TCMCG054C24568
gbkey CDS
Protein Id XP_016651983.1
Location complement(join(5787582..5788193,5788510..5789332,5790084..5790224,5793366..5793622,5793714..5793912,5795853..5796055,5797079..5797290,5798085..5798229,5798342..5798713,5798952..5799170,5799306..5799453,5799587..5799675,5800229..5800492,5800573..5800763,5802083..5802242,5803052..5803222,5803378..5803584,5805890..5805947,5805949..5806154,5806313..5806472,5807068..5807246,5807403..5807417))
Gene LOC103339460
GeneID 103339460
Organism Prunus mume

Protein

Length 1677aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA246160
db_source XM_016796497.1
Definition PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit 1 [Prunus mume]

EGGNOG-MAPPER Annotation

COG_category K
Description DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
KEGG_TC -
KEGG_Module M00182        [VIEW IN KEGG]
KEGG_Reaction R00435        [VIEW IN KEGG]
R00441        [VIEW IN KEGG]
R00442        [VIEW IN KEGG]
R00443        [VIEW IN KEGG]
KEGG_rclass RC02795        [VIEW IN KEGG]
BRITE br01611        [VIEW IN KEGG]
ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
KEGG_ko ko:K02999        [VIEW IN KEGG]
EC 2.7.7.6        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00230        [VIEW IN KEGG]
ko00240        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko03020        [VIEW IN KEGG]
map00230        [VIEW IN KEGG]
map00240        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map03020        [VIEW IN KEGG]
GOs GO:0000428        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005736        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006360        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0030880        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044452        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0055029        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0061695        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTGCCTCAGAGGTTCCGACGACGTCCGTGGATGCGATTAGGTTTGGCTTCTTCACCGACGAAGAGGTTCGGAAGCACAGCTTTGTGAAGGTTACCAGCCCAATTTTGTTCGATGACTCAACACACACGCCCGTGAATGGTGGGCTTTACGACAAGGCGATGGGCCCACTCGGGGATGAACGCGGCCAACTTTGCCAAACATGTGGTCAGACAGCATATACGTGCTCAGGTCATTGTGGTCATATTGACCTTGTTTTGCCAGCTTATAATCCCTTGCTGTTCAACATTCTCCACAAACTTCTACAAAGAACCTGTTTCTTCTGCTACCATTTCCGGACAAGCCGACAACATGTTGAGAAACATGTTTCCCAATTGAAACTCATAATGAAAGGTGATGTTCTTGGGGCTAAAAGGTTAGAGTCTGACTCACCTAGTGAATACTCAGACTGCAATGGGAGTGGTAATCACATAGACAATGATTCGAAGCAGCAAGGATGGACTTCTCTTCAGTTTACAGAGATAATGTCTGTTTTGGATAAGGCTTTGCCAACACATGGGAATTGCAAGGCTAAAAATCCCAAAATCAGTAAACCTACTTTTGGATGGTTCCAAATGAGTGGCAAGGACCATGCGAGAGAAAATGTCCTCAGAGGGTGCAACCTGGAGGGACCCTTGACTGGTCAAGATGAAGAGGCATCTATGCTTGAGGATGAGAATTTTAACAGTGTTGCTACAAGAATGCAAAAAGGACAAGGGAGCAAAGTGCTCAGTGAGTTCTTTAAGCAGAAAAATTCCTTGTCGGGAGATCTATTTCCAACAGAGGTTAAAGAAATTATTAGGCTTCTGTGGGAAAATGAATCTCAACTCTGCTCTTTTATTAGTGATATCCAGTGCCAAGAAACTGGAACAAATGGAGGTCACTCTATGTTTTTCTTGGAGACTGTTCTTGTACCACCAATCAAATTCCGTCCTCCATCCAAGGGTGGTGATTCTGTGATGGAGCATCCTCAAACCGTCTTATTAAGTAAGGTGCTGGAGGCAAATGTCTCTTTGAGCCAAACTCTTACCAACTTAGAGCACTCAAGGACAATTCGACGGTGGAGGGATCTTCAAGAGAGTATAAATGTGATGTTCAATAGCAAAACTGCTGCTGGTCAAGGTCAAAGAGATGCGGCTCCCGGAATATGTCAGTTGCTTGAGAAGAAGGAAGGCCTGTTCCGGCAGAAAATGATGGGCAAAAGGGTAAATTTTGCGTGCCGGTCTGTCATATCTCCGGATCCCTACTTAGCTGTTAATGAGATTGGGATTCCTCCATACTTTGCAACGAGATTAACATATCCTGAGAGAGTTACTCCGTGGAATGTTGACAAGCTGAGGAATGCTATTGTCAACGGTTCTGAAATCCATCCTGGAGCTACACAATATGTTGATAAATCTGGTCCCAAGATTTTGAGGCAAAACAGGAGAGAACGCATTTCAATATCAAGAAAATTACCTTCTTCAAAAGGGGCTGTCATGCAACATGGGAAGGGCTCTGATAATGACATTGAAAGTAAAATAGTGCATCGTCACTTGCGAGATGGGGACATTGTGCTTGTCAATCGACAGCCTACACTTCACAAACCCAGTATAATGGCGCATGTAGTTCGTGTATTGAAGGGGGAGAAAACAATTCGCATGCACTATGCTAATTGCAGTACTTACAATGCTGATTTTGATGGTGATGAGATGAATGTTCATTTTCCGCAAGATGAAATTTCCCGTTCGGAAGCTTACAATATCGTAAATGCAAATAATCAGTACGTAAAGCCGACCAGTGGAGATCCCATTAGAGCCTTGATTCAGGATCATGTTATAAGTGCTGTCCTCCTTACAAAGAAGGATACATTTTTACGTTGGGATCAATTTAATCAGCTTCTTTACAGTTCTTGTGTTTCAGCCCGTGTGTCAGATGCTTTCTCTGGCAAACCAGATAAAAAAGTTTTCATGTTTAACTCTGAAGGCACAATGCAGCCCCTTCTTCCTGCAATTTGGAAACCAGAGCCGCTTTGGACAGGAAAGCAGGTCATCACTGCCTTGCTAAATCATATTACTAGAGGTTCTCCGCCAGTTACTGTTGAAAGAGATGCAAAAATCCCACGTGGTTTTTTTAATTGTAAAAATGTTGAAGGAGAAGATAAATCTGGTAAAGATGGACAGCAAAAAAAGAGGAAACCAAGCAAAGAACAAGCAACTGATAAAGATAGCTCAAAGGAAAAAGAGGAGCCTGATGAGAACCATTTATTAATATATAGAAACAACTTAGTGCGCGGCGTGATTGACAAGGCTCAGTTTGGTGATTATGGTTTGGTCCATACAGTTCAGGAGTTCTATGGCTCAGATACTGCAGGAAAATTGCTTTCTGTATTGAGTCATTTATTTACCGTGTATTTGCAGATGCATGGGTTCACGTGTGGGATTGATGATCTTTTGCTATTGGAAAGCAAAGACGCAAAAATGAAGGATCAACTAGAAAGTTGTGAAGATGTGGGTGAAAATGTTTACCGTGATTTTATCGAGGTCAAAGATGTTAAGAGAAAAGATCCAGTGGAACTGCAATTAAACATCGAAAATTTTATTCGGAGTAATGGAGAATCTGCCTTGGCATCCTTGGATAGGAGAATGATTAGTCAGCTTAATAACAAGACCTCCAACTCTGATGTGTTCAAACAATTATTGTTGAGGGGGTTATCAAAACCATCAGTTAAAAATTGTATCTATCTTATGACAACATCTGGGGCTAAAGGTAGTGTGGCTAATCTCCAACAAATAACTTCATATTTGGGTCAGCAAGAGCTAGAAGGCAAACGGGTCCCTCAAATGATTTCTGGAAAGACCTTACCGTGCTTTCCCCCATGGGATTGGTCATCTCGAGCAGGAGGCTTTATCATTGATCGTTTTCTTACTGGTCTTCATCCTCAGGAGTACTATTTCCATTGCATGGCTGGCCGTGAAGGGTTGGTTGATACAGCTGTCAAAACATCTCGTAGTGGATACTTGCAAAGATGCATAATAAAAAATCTTGAGTGCCTAAAAGTTTCTTATGACAATACCGTCCGTGATGCTGATGGTTCCATTATTCAATTTCGTTATGGAGAAGATGGCATTGATGTCCATATGACGAGCTTTATTCAAAAGTTTGAATCCCTTATAGCTAATAAAGAAATGTTTCACAAGAAAGGTCGTCGTCAAATGGATAAATTAAATCCTTATATTAAAGACTTGCCTTTGGCTCTCAAAGAAAAAGCAGAGAAGTTTGTGCATAATTTGGCCTTGAAAGAGAAAGATCATAACTTCCAAGAGGATTTCTTGAAGTTAATGGAGCACAAATACCTCTGTAGTCTTGCTCAACCTGGAGAACCAGTTGGTGTTCTTGCCGGTCAGTCTGTAGGAGAACCGTCAACACAGATGACACTGAATACTTTCCATCTTGCGGGACGAGGTGAAATGAATGTGACCCTTGGAATCCCACGCCTCCAAGAGATCTTGATGACTGCTGCAAATGATATTAAGACGCCGGTTATGACATGCCCATTGCAAAAGGGGAGATCGAAGGAGGAAGCTCAGGAGCTAGCTGATAAGTTGAAGAAGATCACTGTGGCAGACATAATCGAGAGTATGAAAGTAACCTTTGTGCCATTTTTCATTCAGGATGGTCAAACTTGCCGTATTTATAAGCTTGAGATGACACTCCACATACCAGAACATCTTCGAACCATCATTGAATATTCATCAGAAGATTGGGAGGAAATCCTAGAGATTGTGTTTGTTAGGGAGTTGGAAGACGCCATACAAAATCATATTCTTTTGCTTTCTAAAATTAGTGGTATTAAAAATTTCACGCCTGATTCACAACCAAAGGCATCAAATGAGACAGATGAAAATCTTTCTGAAAAAAGATCTCAACGTGAGGAAGAAGATGATGACAATGGTGGTGCAGATGATGGTGAACATGGTGAAGGGGTCGAGGATTTTGGTCTGGATGCCCATAAGCGAAAGCTACAAGCTACAGATGAGATGGATTATGAAGATGGCTGTGATGATGAAGTGAGAGAAGCAGACTTGTCAGATGGAGATGAAAGTGAAATTGATGAGGAGGAAAATGAAGTTGAAATTGGTAAGGATGGTGAAATTGGGGTTATCGATGCTAGTGATGAAATGCCTGGAAGTCCTTTAGAAGAAGCTGGGGACCTAGCTAAGCCCAAGTCGAAGGAGAAAAAGACCAAATCAGGATCCCAAATTAGAAAGAAAAGGAAGGTCCGAGCAGAGATGGTAAAAAAGGAGACTGACAGGGCAATTTTTGTGTCAGCAAAGGGGTTCCACTTCGAGGTCCATTTTAGATTTACCGACAATGAACCTCATATTTTGCTGTCTCAGATTGCTCAGAAGACAGCCCAGAAGGTTTATATTCAGAGATCTGGAAAGGTTGCTGACTGTAAACAAATTACTTGCGATGAAAATCAAGTCCTCTGCTTTGGGAAGGATCCTGAAAATAAACAAAGTTTTTCATCCAAGGAAAAAAAGGAGATGCCAGCTCTGCAAACTACTGGAATTGATTTCGGTACATTTTGGCAACTGCAAGATATTCTTGATGTCAGGTATATTTATTCCAATAACATACATGCTATGCTGAACACTTACGGAGTAGAAGCCGCCAGGGAAACTATCATCCGAGAAATAAATAATGTTTTCAAGTCTTACGGAATATCCGTCAACATTAGGCATCTTACACTAATAGCTGACTTTATGACTCATGCTGGTGGTTATCGTCCATTGAATCGATTCGGAGGCATTGTAGAGTCGATATCTCCGTTTAATAAAATGACTTTTGAGACAGCTTCCAAGTTCATTGTTGAAGCAGCATATCATGGGCAGGTGGATCGCTTGGAAACCCCATCCGCTAGGATCTGTCTTGGATTGCCAGTAAATGTGGGTACTGGATGTTTTGATTTGATGCACAAGATGGAGGTTGAATGCACACAGAGATAG
Protein:  
MAASEVPTTSVDAIRFGFFTDEEVRKHSFVKVTSPILFDDSTHTPVNGGLYDKAMGPLGDERGQLCQTCGQTAYTCSGHCGHIDLVLPAYNPLLFNILHKLLQRTCFFCYHFRTSRQHVEKHVSQLKLIMKGDVLGAKRLESDSPSEYSDCNGSGNHIDNDSKQQGWTSLQFTEIMSVLDKALPTHGXNCKAKNPKISKPTFGWFQMSGKDHARENVLRGCNLEGPLTGQDEEASMLEDENFNSVATRMQKGQGSKVLSEFFKQKNSLSGDLFPTEVKEIIRLLWENESQLCSFISDIQCQETGTNGGHSMFFLETVLVPPIKFRPPSKGGDSVMEHPQTVLLSKVLEANVSLSQTLTNLEHSRTIRRWRDLQESINVMFNSKTAAGQGQRDAAPGICQLLEKKEGLFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFATRLTYPERVTPWNVDKLRNAIVNGSEIHPGATQYVDKSGPKILRQNRRERISISRKLPSSKGAVMQHGKGSDNDIESKIVHRHLRDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRSEAYNIVNANNQYVKPTSGDPIRALIQDHVISAVLLTKKDTFLRWDQFNQLLYSSCVSARVSDAFSGKPDKKVFMFNSEGTMQPLLPAIWKPEPLWTGKQVITALLNHITRGSPPVTVERDAKIPRGFFNCKNVEGEDKSGKDGQQKKRKPSKEQATDKDSSKEKEEPDENHLLIYRNNLVRGVIDKAQFGDYGLVHTVQEFYGSDTAGKLLSVLSHLFTVYLQMHGFTCGIDDLLLLESKDAKMKDQLESCEDVGENVYRDFIEVKDVKRKDPVELQLNIENFIRSNGESALASLDRRMISQLNNKTSNSDVFKQLLLRGLSKPSVKNCIYLMTTSGAKGSVANLQQITSYLGQQELEGKRVPQMISGKTLPCFPPWDWSSRAGGFIIDRFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCIIKNLECLKVSYDNTVRDADGSIIQFRYGEDGIDVHMTSFIQKFESLIANKEMFHKKGRRQMDKLNPYIKDLPLALKEKAEKFVHNLALKEKDHNFQEDFLKLMEHKYLCSLAQPGEPVGVLAGQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAANDIKTPVMTCPLQKGRSKEEAQELADKLKKITVADIIESMKVTFVPFFIQDGQTCRIYKLEMTLHIPEHLRTIIEYSSEDWEEILEIVFVRELEDAIQNHILLLSKISGIKNFTPDSQPKASNETDENLSEKRSQREEEDDDNGGADDGEHGEGVEDFGLDAHKRKLQATDEMDYEDGCDDEVREADLSDGDESEIDEEENEVEIGKDGEIGVIDASDEMPGSPLEEAGDLAKPKSKEKKTKSGSQIRKKRKVRAEMVKKETDRAIFVSAKGFHFEVHFRFTDNEPHILLSQIAQKTAQKVYIQRSGKVADCKQITCDENQVLCFGKDPENKQSFSSKEKKEMPALQTTGIDFGTFWQLQDILDVRYIYSNNIHAMLNTYGVEAARETIIREINNVFKSYGISVNIRHLTLIADFMTHAGGYRPLNRFGGIVESISPFNKMTFETASKFIVEAAYHGQVDRLETPSARICLGLPVNVGTGCFDLMHKMEVECTQR